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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24386026_24386223_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24386026 - 24386223

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTACTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAC

U12 Branch Point Sequence:

CTTTTTTGTACT

Flanking Amino Acid:

KGAAGAPGPKGDQGEKGSRG

Intron Amino Acid Position:

698

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

71.4

41.2

Major BPS

61.6

0.29

1.4

63.4

Major PPT

0.76

0.8

78.5

34.7

Minor 5ss

45.7

-0.5

2.5

58.3

46.4

Minor BPS

54.2

0.21

1.8

75.74

41.1

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884