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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24391855_24392390_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24391855 - 24392390

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTCT

5'SS Class:

strong_major

3'SS Sequence:

GGTTCCTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATGTTTTCAATT

Flanking Amino Acid:

FSASNTGLNGGSFAEDTLKK

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

33.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

72.8

0.51

69.5

41.6

Minor 5ss

48.4

-0.1

2.5

68.6

42.1

Minor BPS

60.2

0.4

1.5

73.67

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884