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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24394345_24394456_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24394345 - 24394456

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGATTT

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

ACTCCTATAATT

Flanking Amino Acid:

LNTGLSTSSTVFGVQNNLSP

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.2

81.6

33.2

Major BPS

75.5

0.63

1.1

34.4

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

39.3

-1.2

3.2

56.7

47.5

Minor BPS

57.6

0.32

1.6

72.58

38.6

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884