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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24394529_24395287_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24394529 - 24395287

Intron Length:

759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTCC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

AAGTAATAAAAT

Flanking Amino Acid:

INAMSHSTGSVFGVPNNLAP

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

34.6

Major BPS

70.8

0.52

70.6

31.6

Major PPT

87.9

0.85

0.7

83.3

Minor 5ss

40.4

-1.1

2.9

53.8

43.4

Minor BPS

43.3

-0.4

2.1

59.47

42.9

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884