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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24397012_24398642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24397012 - 24398642

Intron Length:

1631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATGATCT

Flanking Amino Acid:

ASTRGRSQSRESEIRVRLQS

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

84.2

0.77

0.7

76.8

31.8

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

55.5

0.25

79.93

41.2

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884