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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24402255_24403002_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24402255 - 24403002

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TCTTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

AATGTCTCATTT

Flanking Amino Acid:

VTTRLTSLPPKGGSSSGLKT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

81.1

32.8

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

91.2

0.93

0.6

84.1

30.8

Minor 5ss

39.6

-1.2

2.9

41.2

Minor BPS

46.8

-0.1

1.8

63.18

41.5

Associated Gene:

Gene:

COL17A1

Ensembl Gene ID:

ENSAPLG00000006175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038480

24371956 - 24403839

31884

ENSAPLT00000019160

24371956 - 24403839

31884

ENSAPLT00000006397

24371956 - 24403839

31884