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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24433385_24433899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24433385 - 24433899

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTACGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACCCTTTTAATT

Flanking Amino Acid:

SERRHISRAADIQRVSERNA

Intron Amino Acid Position:

1468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.2

35.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.3

0.68

0.9

77.3

Minor 5ss

29.2

-2.4

2.8

32.4

36.1

Minor BPS

59.7

0.38

1.2

66.47

39.2

Associated Gene:

Gene:

CFAP43

Ensembl Gene ID:

ENSAPLG00000006084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006315

24432142 - 24475630

43489

ENSAPLT00000006223

24432142 - 24475630

43489