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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24434959_24436598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24434959 - 24436598

Intron Length:

1640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTGAGTTAC

5'SS Class:

major

3'SS Sequence:

TTTTAATTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGTTTTTAATT

Flanking Amino Acid:

VLPISKDRQLFLTMLNYDSR

Intron Amino Acid Position:

1390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.7

0.76

0.8

81.6

34.6

Minor 5ss

36.9

-1.5

2.9

45.1

38.2

Minor BPS

71.1

0.74

1.2

78.42

39.1

Associated Gene:

Gene:

CFAP43

Ensembl Gene ID:

ENSAPLG00000006084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006315

24432142 - 24475630

43489

ENSAPLT00000006223

24432142 - 24475630

43489