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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24440122_24440420_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24440122 - 24440420

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATTGTAATGACA

Flanking Amino Acid:

AYENAIAEDKNLESDFSKDF

Intron Amino Acid Position:

1146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

79.5

0.66

0.8

73.3

37.1

Minor 5ss

31.1

-2.2

3.2

41.7

Minor BPS

46.2

-0.3

1.9

62.31

37.4

Associated Gene:

Gene:

CFAP43

Ensembl Gene ID:

ENSAPLG00000006084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006315

24432142 - 24475630

43489

ENSAPLT00000006223

24432142 - 24475630

43489