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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24440508_24442056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24440508 - 24442056

Intron Length:

1549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAATTAT

5'SS Class:

major

3'SS Sequence:

GGTTTTGCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

CATTCTTGAAAT

Flanking Amino Acid:

HFFMKKQKENVNVTGIIQNT

Intron Amino Acid Position:

1117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

79.4

29.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

0.58

68.9

Minor 5ss

43.6

-0.7

62.1

42.9

Minor BPS

61.5

0.44

1.6

75.41

40.9

Associated Gene:

Gene:

CFAP43

Ensembl Gene ID:

ENSAPLG00000006084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006315

24432142 - 24475630

43489

ENSAPLT00000006223

24432142 - 24475630

43489