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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24442165_24442245_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24442165 - 24442245

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAG

5'SS Class:

strong_major

3'SS Sequence:

AATCTTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTATTACAA

Flanking Amino Acid:

KVTLEMVIYQEELKIVNLIY

Intron Amino Acid Position:

1081

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

70.6

41.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.4

0.64

0.9

72.5

36.7

Minor 5ss

39.7

-1.2

2.8

47.2

Minor BPS

48.9

-0

1.9

65.08

41.3

Associated Gene:

Gene:

CFAP43

Ensembl Gene ID:

ENSAPLG00000006084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006315

24432142 - 24475630

43489

ENSAPLT00000006223

24432142 - 24475630

43489