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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24442366_24443250_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24442366 - 24443250

Intron Length:

885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAATTAA

5'SS Class:

major

3'SS Sequence:

TTCCCTTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TTTCCCTTCCCC

Flanking Amino Acid:

LNEEKEKRRRVLENEWKKLE

Intron Amino Acid Position:

1041

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

73.5

33.5

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

79.9

0.67

0.7

72.6

32.1

Minor 5ss

38.4

-1.3

2.9

40.2

Minor BPS

45.5

-0.3

3.6

75.89

40.7

Associated Gene:

Gene:

CFAP43

Ensembl Gene ID:

ENSAPLG00000006084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006315

24432142 - 24475630

43489

ENSAPLT00000006223

24432142 - 24475630

43489