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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24445096_24445865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24445096 - 24445865

Intron Length:

770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCCTGAA

5'SS Class:

major

3'SS Sequence:

TTCCTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAT

U12 Branch Point Sequence:

AAATCCTGATAA

Flanking Amino Acid:

EQVLTVQDSEIKAEKYLTPQ

Intron Amino Acid Position:

943

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.2

64.8

37.1

Major BPS

78.8

0.71

67.6

40.6

Major PPT

89.7

0.89

0.6

88.2

21.7

Minor 5ss

-2.2

3.3

46.1

Minor BPS

48.5

-0.1

1.8

58.88

39.7

Associated Gene:

Gene:

CFAP43

Ensembl Gene ID:

ENSAPLG00000006084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006315

24432142 - 24475630

43489

ENSAPLT00000006223

24432142 - 24475630

43489