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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24446073_24447709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24446073 - 24447709

Intron Length:

1637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGGTAT

U12 Branch Point Sequence:

TTTTTGGTATTT

Flanking Amino Acid:

QKVNQIVLLKDIIYKVKTAF

Intron Amino Acid Position:

874

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

1.1

80.5

33.9

Major BPS

56.4

0.16

1.6

57.4

49.1

Major PPT

81.4

0.71

0.9

78.1

40.1

Minor 5ss

38.5

-1.3

2.8

52.3

44.3

Minor BPS

44.5

-0.3

2.7

74.56

43.3

Associated Gene:

Gene:

CFAP43

Ensembl Gene ID:

ENSAPLG00000006084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006315

24432142 - 24475630

43489

ENSAPLT00000006223

24432142 - 24475630

43489