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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24448854_24449564_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24448854 - 24449564

Intron Length:

711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCTCT

5'SS Class:

weak_major

3'SS Sequence:

TGTTTTTGAGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

GACCTTTTAACT

Flanking Amino Acid:

SMSVKGRTVKCFHIACEVQN

Intron Amino Acid Position:

768

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.2

72.3

40.1

Major BPS

89.7

0.98

0.7

89.9

Major PPT

76.2

0.59

40.3

Minor 5ss

57.2

0.24

2.5

74.8

41.2

Minor BPS

63.5

0.5

1.3

70.82

40.1

Associated Gene:

Gene:

CFAP43

Ensembl Gene ID:

ENSAPLG00000006084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006223

24432142 - 24475630

43489

ENSAPLT00000006315

24432142 - 24475630

43489