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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24450734_24452244_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24450734 - 24452244

Intron Length:

1511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTTTG

5'SS Class:

major

3'SS Sequence:

TGTTGTATGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TGTCTTTCAACA

Flanking Amino Acid:

MTWLGQKIKKVMREETERFA

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

73.3

38.2

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

71.5

0.48

1.1

70.4

44.5

Minor 5ss

2.4

66.9

44.3

Minor BPS

59.4

0.29

1.5

69.57

36.4

Associated Gene:

Gene:

CFAP43

Ensembl Gene ID:

ENSAPLG00000006084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006315

24432142 - 24475630

43489

ENSAPLT00000006223

24432142 - 24475630

43489