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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24453984_24454413_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24453984 - 24454413

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGCAGA

5'SS Class:

major

3'SS Sequence:

GTGACTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

ATTTGCTGAACT

Flanking Amino Acid:

VLFIYHTSTMEILAQKHCHS

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

61.6

44.7

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

70.9

0.47

62.1

44.2

Minor 5ss

37.5

-1.4

3.1

45.3

44.7

Minor BPS

67.9

0.64

1.9

87.59

37.5

Associated Gene:

Gene:

CFAP43

Ensembl Gene ID:

ENSAPLG00000006084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006315

24432142 - 24475630

43489

ENSAPLT00000006223

24432142 - 24475630

43489