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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24455084_24456365_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24455084 - 24456365

Intron Length:

1282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TCCATTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTTTTTCCATT

Flanking Amino Acid:

IFCLPSALTEDNEKFVNEQG

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

87.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

81.4

0.71

0.8

80.3

31.6

Minor 5ss

36.1

-1.6

50.2

45.8

Minor BPS

53.3

0.19

1.9

79.05

Associated Gene:

Gene:

CFAP43

Ensembl Gene ID:

ENSAPLG00000006084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006223

24432142 - 24475630

43489

ENSAPLT00000006315

24432142 - 24475630

43489