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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24471807_24473991_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

24471807 - 24473991

Intron Length:

2185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTAATGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTCTCCTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

71.6

38.4

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

63.2

0.3

1.1

64.4

34.5

Minor 5ss

34.2

-1.8

3.5

44.2

44.6

Minor BPS

82.2

0.87

1.2

79.08

Associated Gene:

Gene:

CFAP43

Ensembl Gene ID:

ENSAPLG00000006084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006315

24432142 - 24475630

43489

ENSAPLT00000006223

24432142 - 24475630

43489