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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24552854_24556208_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24552854 - 24556208

Intron Length:

3355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TTGACTCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

TATTCTTTGACT

Flanking Amino Acid:

ETEREKDALKAELLKMKKQA

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

72.5

37.3

Major BPS

71.4

0.53

1.2

63.4

Major PPT

67.7

0.4

41.4

Minor 5ss

33.2

-1.9

3.1

43.3

43.8

Minor BPS

83.2

1.13

0.9

92.06

30.2

Associated Gene:

Gene:

CFAP58

Ensembl Gene ID:

ENSAPLG00000005743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005932

24527873 - 24585299

57427