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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24578420_24580004_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24578420 - 24580004

Intron Length:

1585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAT

U12 Branch Point Sequence:

CTTTTTTTGTCT

Flanking Amino Acid:

TLREKTKQLKVLSSELNMYE

Intron Amino Acid Position:

793

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

83.5

27.6

Major BPS

55.3

0.13

1.3

64.4

41.8

Major PPT

79.6

0.67

0.9

81.2

36.5

Minor 5ss

36.9

-1.5

3.1

49.9

40.5

Minor BPS

-0.2

3.4

77.64

39.7

Associated Gene:

Gene:

CFAP58

Ensembl Gene ID:

ENSAPLG00000005743

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005932

24527873 - 24585299

57427