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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24599472_24606849_F

Intron Information:

Intron Rank:

140819

Intron Class:

major

Intron Phase:

Intron Coordinates:

24599472 - 24606849

Intron Length:

7378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAA

U12 Branch Point Sequence:

ATTCTCTCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

64.7

0.37

31.5

Major PPT

0.65

0.8

73.1

31.1

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

49.5

-0

67.27

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025831

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038169

24597991 - 24606995

9005