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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24922552_24924043_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24922552 - 24924043

Intron Length:

1492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TACTGCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

CTTTTGTTACTG

Flanking Amino Acid:

SIGQSYLNSTGYRRIVSNNC

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

77.6

32.8

Major BPS

71.4

0.53

1.2

63.4

Major PPT

71.1

0.48

0.9

61.9

39.6

Minor 5ss

31.6

-2.1

3.1

31.7

42.6

Minor BPS

46.8

-0.3

2.3

57.74

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017158

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033694

24917986 - 24930670

12685