Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_24972656_24973489_F

Intron Information:

Intron Rank:

150636

Intron Class:

major

Intron Phase:

Intron Coordinates:

24972656 - 24973489

Intron Length:

834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTGCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TAAAATGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

1.1

77.3

37.8

Major BPS

73.9

0.59

30.2

Major PPT

76.9

0.61

0.8

69.5

36.8

Minor 5ss

30.8

-2.2

3.1

41.8

44.7

Minor BPS

45.6

-0.2

2.1

63.67

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023140

24967354 - 24976179

8826