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Intron Name: Anas_platyrhynchos_platyrhynchos_6_24973526_24974090_F

Intron Information:

Intron Rank:

150637

Intron Class:

major

Intron Phase:

Intron Coordinates:

24973526 - 24974090

Intron Length:

565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CCATCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTGCTTTGAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.2

28.9

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

81.4

0.71

0.8

32.2

Minor 5ss

29.1

-2.4

3.2

36.8

41.9

Minor BPS

50.8

0.02

1.5

62.51

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023140

24967354 - 24976179

8826