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Intron Name: Anas_platyrhynchos_platyrhynchos_6_25128416_25129031_F

Intron Information:

Intron Rank:

125326

Intron Class:

major

Intron Phase:

Intron Coordinates:

25128416 - 25129031

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCCCAA

U12 Branch Point Sequence:

ACACCCCAAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.8

38.5

Major BPS

46.7

-0.2

1.2

52.4

Major PPT

86.6

0.82

0.8

81.1

30.9

Minor 5ss

36.1

-1.6

3.1

51.1

45.4

Minor BPS

46.6

-0.2

56.06

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047391

25127166 - 25130400

3235