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Intron Name: Anas_platyrhynchos_platyrhynchos_6_25129116_25130315_F

Intron Information:

Intron Rank:

125327

Intron Class:

major

Intron Phase:

Intron Coordinates:

25129116 - 25130315

Intron Length:

1200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTGTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.8

88.6

27.1

Major BPS

100

1.24

0.5

100

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

42.7

-0.8

3.4

64.1

47.4

Minor BPS

59.9

0.39

1.6

78.46

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047391

25127166 - 25130400

3235