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Intron Name: Anas_platyrhynchos_platyrhynchos_6_25146912_25146962_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25146912 - 25146962

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAT|GCCACAGAT

5'SS Class:

weak_major

3'SS Sequence:

GTTGCTGAAGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

TTGCTCACAACA

Flanking Amino Acid:

WLLVLQGQEVFLQLFPEYSK

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.6

0.08

1.4

58.5

43.2

Major BPS

0.42

1.1

57.3

41.7

Major PPT

45.5

-0.2

1.7

47.9

Minor 5ss

25.2

-2.9

4.2

43.1

44.3

Minor BPS

49.6

-0

1.8

65.98

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005363

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045211

25146652 - 25147868

1217