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Intron Name: Anas_platyrhynchos_platyrhynchos_6_25147289_25147791_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25147289 - 25147791

Intron Length:

503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

TAATGCTGCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

ATGAACAAAAAT

Flanking Amino Acid:

LLLLHTYTFSQLGQATPPSH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.5

Major BPS

58.9

0.22

49.8

35.1

Major PPT

47.2

-0.1

1.7

54.4

45.3

Minor 5ss

-0.5

2.8

65.4

39.4

Minor BPS

41.2

-0.5

58.77

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005363

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005533

25145955 - 25147868

1914

ENSAPLT00000045211

25146652 - 25147868

1217