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Intron Name: Anas_platyrhynchos_platyrhynchos_6_25310662_25316512_F

Intron Information:

Intron Rank:

124098

Intron Class:

major

Intron Phase:

Intron Coordinates:

25310662 - 25316512

Intron Length:

5851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATCATTTTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.1

30.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.8

0.83

0.7

81.7

30.4

Minor 5ss

30.6

-2.2

41.1

45.5

Minor BPS

62.2

0.38

1.2

65.4

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016898

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026564

25310308 - 25318720

8413