About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_25386969_25387041_F


Intron Information:

Intron Rank:
150591

Intron Class:
major

Intron Phase:

Intron Coordinates:
25386969 - 25387041

Intron Length:
73

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTCTAAAAA

5'SS Class:
major

3'SS Sequence:
ACTGACATCTCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACTGAC

U12 Branch Point Sequence:
TTGCACAGAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
60.5
0.25
1.3
62.9
37.1

Major BPS
64.8
0.37
0.9
55.1
32.8

Major PPT
64.5
0.33
1
59.2
40.8

Minor 5ss
33.6
-1.9
2.8
40.2
45.5

Minor BPS
47.7
-0.1
1.9
64.42
41

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

25384664 - 25387647
2984