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Intron Name: Anas_platyrhynchos_platyrhynchos_6_25432347_25433735_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25432347 - 25433735

Intron Length:

1389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGGGTCCT

5'SS Class:

major

3'SS Sequence:

TTCTTTGCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TGACCCTTATTT

Flanking Amino Acid:

PRGFKPRPGAEVFPQLLSLR

Intron Amino Acid Position:

1237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

62.7

43.4

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

80.5

0.69

0.8

75.8

32.8

Minor 5ss

30.5

-2.2

3.2

42.5

44.2

Minor BPS

62.3

0.46

1.6

75.48

Associated Gene:

Gene:

SORCS1

Ensembl Gene ID:

ENSAPLG00000004914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033836

25430699 - 25716285

285587

ENSAPLT00000005128

25430699 - 25716285

285587