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Intron Name: Anas_platyrhynchos_platyrhynchos_6_25471784_25479918_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

25471784 - 25479918

Intron Length:

8135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCAAT

5'SS Class:

major

3'SS Sequence:

AATGTTAAAACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCCTTAATG

Flanking Amino Acid:

PCVCTEADFDCDYGYERHSN

Intron Amino Acid Position:

749

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

0.9

75.8

35.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

58.9

0.2

1.1

44.3

Minor 5ss

35.7

-1.6

45.4

43.9

Minor BPS

1.09

87.41

29.8

Associated Gene:

Gene:

SORCS1

Ensembl Gene ID:

ENSAPLG00000004914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033836

25430699 - 25716285

285587

ENSAPLT00000022618

25430699 - 25716285

285587

ENSAPLT00000005128

25430699 - 25716285

285587