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Intron Name: Anas_platyrhynchos_platyrhynchos_6_25512697_25528388_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25512697 - 25528388

Intron Length:

15692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTTGCTTTAATG

Flanking Amino Acid:

HEGVAPNRFYWSMMGSGREP

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

33.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

82.4

0.73

0.8

76.8

31.8

Minor 5ss

30.9

-2.2

3.3

36.6

41.5

Minor BPS

66.2

0.37

1.5

66.31

42.6

Associated Gene:

Gene:

SORCS1

Ensembl Gene ID:

ENSAPLG00000004914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033836

25430699 - 25716285

285587

ENSAPLT00000022618

25430699 - 25716285

285587

ENSAPLT00000005128

25430699 - 25716285

285587