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Intron Name: Anas_platyrhynchos_platyrhynchos_6_25625959_25715081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25625959 - 25715081

Intron Length:

89123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

CTTTTGCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACCAT

U12 Branch Point Sequence:

CTAACCATGATT

Flanking Amino Acid:

MVHWSGHNSSVILILTKLYD

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.3

65.8

40.2

Major BPS

57.8

0.19

1.3

67.1

39.2

Major PPT

84.2

0.77

0.8

81.3

30.7

Minor 5ss

32.5

-2

2.6

33.8

33.9

Minor BPS

52.6

0.16

1.7

69.6

41.4

Associated Gene:

Gene:

SORCS1

Ensembl Gene ID:

ENSAPLG00000004914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033836

25430699 - 25716285

285587

ENSAPLT00000022618

25430699 - 25716285

285587

ENSAPLT00000005128

25430699 - 25716285

285587