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Intron Name: Anas_platyrhynchos_platyrhynchos_6_25877143_25881358_R

Intron Information:

Intron Rank:

140350

Intron Class:

major

Intron Phase:

Intron Coordinates:

25877143 - 25881358

Intron Length:

4216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTTTTCTTACAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

22.1

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

78.5

0.64

78.5

33.7

Minor 5ss

-2.1

3.1

39.9

46.1

Minor BPS

67.5

0.54

1.7

80.08

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027347

25876091 - 25883346

7256