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Intron Name: Anas_platyrhynchos_platyrhynchos_6_26060_26379_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26060 - 26379

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGAATG

5'SS Class:

major

3'SS Sequence:

TTTTCCTCACCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TTTTCCTCACCA

Flanking Amino Acid:

PASQCVIDGVRGWDSYMVYL

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

Major BPS

0.87

0.8

85.6

Major PPT

81.1

0.7

0.8

75.1

34.6

Minor 5ss

38.9

-1.2

3.1

51.3

40.2

Minor BPS

69.1

0.6

1.8

83.78

36.8

Associated Gene:

Gene:

CHUK

Ensembl Gene ID:

ENSAPLG00000011503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039931

12183 - 46227

34045

ENSAPLT00000037450

14485 - 44896

30412

ENSAPLT00000012207

12183 - 45972

33790