Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_26146910_26146997_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26146910 - 26146997

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTCAGC

5'SS Class:

major

3'SS Sequence:

CTTCATTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTCATTTACT

Flanking Amino Acid:

LQKVLGPSCKVLVLRNHGVV

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

61.6

43.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

72.5

0.51

0.9

66.5

39.1

Minor 5ss

45.9

-0.4

2.6

61.2

43.2

Minor BPS

66.2

0.59

1.9

85.58

40.4

Associated Gene:

Gene:

ADD3

Ensembl Gene ID:

ENSAPLG00000004481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035605

26126806 - 26155161

28356

ENSAPLT00000033135

26112617 - 26155161

42545

ENSAPLT00000025631

26093949 - 26156869

62921

ENSAPLT00000004663

26112617 - 26155161

42545

ENSAPLT00000045549

26093949 - 26155161

61213