Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_26152428_26154454_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26152428 - 26154454

Intron Length:

2027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCCATTCTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TGCACCTAAATA

Flanking Amino Acid:

TIERKQQGLEENHEDFYTQN

Intron Amino Acid Position:

579

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.2

76.2

39.9

Major BPS

71.2

0.53

70.3

31.9

Major PPT

74.3

0.55

0.8

72.9

31.8

Minor 5ss

29.8

-2.3

3.1

41.5

44.9

Minor BPS

56.5

0.2

1.7

64.57

42.1

Associated Gene:

Gene:

ADD3

Ensembl Gene ID:

ENSAPLG00000004481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033135

26112617 - 26155161

42545