Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_26244842_26247488_F

Intron Information:

Intron Rank:

137846

Intron Class:

major

Intron Phase:

Intron Coordinates:

26244842 - 26247488

Intron Length:

2647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TGCTCTGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TATTCTGTACTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

63.8

43.3

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

78.3

0.64

0.9

72.4

37.7

Minor 5ss

41.8

-0.9

2.8

54.9

43.3

Minor BPS

49.3

-0

2.2

67.71

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024232

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031367

26244393 - 26247846

3454