Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_26321822_26325815_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

26321822 - 26325815

Intron Length:

3994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAACCGA

5'SS Class:

weak_major

3'SS Sequence:

CGACTGCCGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATGAAA

U12 Branch Point Sequence:

CCTCCCTCGACT

Flanking Amino Acid:

KPGLRDARGTLRKLLRKEPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.9

0.19

1.1

47.2

43.1

Major BPS

57.6

0.19

1.3

67.9

36.3

Major PPT

56.5

0.15

1.1

50.4

39.1

Minor 5ss

38.8

-1.3

3.2

52.5

45.4

Minor BPS

59.5

0.38

1.6

73.07

43.9

Associated Gene:

Gene:

DUSP5

Ensembl Gene ID:

ENSAPLG00000004277

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004385

26321783 - 26334260

12478