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Intron Name: Anas_platyrhynchos_platyrhynchos_6_26351711_26351825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26351711 - 26351825

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTTCTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

TTTAACTGAACT

Flanking Amino Acid:

EESISLMKETEGKREKINEL

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.4

30.4

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

70.9

0.47

1.1

71.2

38.9

Minor 5ss

37.4

-1.4

3.2

51.9

44.9

Minor BPS

67.6

0.63

1.7

87.41

37.2

Associated Gene:

Gene:

SMC3

Ensembl Gene ID:

ENSAPLG00000003586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003819

26344324 - 26367748

23425