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Intron Name: Anas_platyrhynchos_platyrhynchos_6_26355283_26355747_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26355283 - 26355747

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACGG

5'SS Class:

strong_major

3'SS Sequence:

TATGCTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TATGCTTTAACA

Flanking Amino Acid:

QQLLRAATGKAILNGIDSIN

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.9

66.4

45.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

74.6

0.55

69.8

40.1

Minor 5ss

31.4

-2.1

39.3

45.9

Minor BPS

76.4

0.83

1.3

80.29

35.7

Associated Gene:

Gene:

SMC3

Ensembl Gene ID:

ENSAPLG00000003586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003819

26344324 - 26367748

23425