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Intron Name: Anas_platyrhynchos_platyrhynchos_6_26358548_26359410_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26358548 - 26359410

Intron Length:

863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TTATGCTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TGATGTGCAATT

Flanking Amino Acid:

AFTMDCITLEGDQVSHRGAL

Intron Amino Acid Position:

655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

93.3

21.1

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

67.2

0.39

66.1

40.6

Minor 5ss

-1

59.7

44.8

Minor BPS

41.6

-0.5

2.4

61.31

43.1

Associated Gene:

Gene:

SMC3

Ensembl Gene ID:

ENSAPLG00000003586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003819

26344324 - 26367748

23425