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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2636537_2639313_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2636537 - 2639313

Intron Length:

2777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAA

U12 Branch Point Sequence:

TTTTTTTTTCCA

Flanking Amino Acid:

FHWQATIMGPPDSAYQGGVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

80.4

Major BPS

66.7

0.42

58.1

38.5

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

42.2

-0.9

2.9

61.3

Minor BPS

44.4

-0.4

3.6

74.12

37.8

Associated Gene:

Gene:

UBE2D1

Ensembl Gene ID:

ENSAPLG00000029826

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044373

2631389 - 2640692

9304