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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2646728_2647998_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2646728 - 2647998

Intron Length:

1271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAACAT

U12 Branch Point Sequence:

ATGGTTGTATGT

Flanking Amino Acid:

WRELPASQKQVYEEARKADW

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.7

1.1

0.7

87.9

29.3

Major BPS

54.4

0.11

61.4

34.3

Major PPT

79.4

0.66

0.8

73.9

36.8

Minor 5ss

43.8

-0.7

2.8

57.8

46.8

Minor BPS

37.4

-0.8

2.2

52.33

43.6

Associated Gene:

Gene:

TFAM

Ensembl Gene ID:

ENSAPLG00000010787

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029820

2644840 - 2652106

7267

ENSAPLT00000011238

2644749 - 2652106

7358