Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_26482614_26484009_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

26482614 - 26484009

Intron Length:

1396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGAC

5'SS Class:

major

3'SS Sequence:

ATCTTTGTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

AATTTTTTACAT

Flanking Amino Acid:

EILENARKEKDQDWESGSEI

Intron Amino Acid Position:

710

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

67.9

37.7

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

72.1

0.5

1.1

68.3

41.7

Minor 5ss

27.9

-2.5

3.2

34.6

41.8

Minor BPS

55.2

0.24

1.7

72.15

38.8

Associated Gene:

Gene:

RBM20

Ensembl Gene ID:

ENSAPLG00000003582

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003649

26415143 - 26492162

77020