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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2652599_2652688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2652599 - 2652688

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCG

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

ACTGACTGACTG

Flanking Amino Acid:

DKEEATRRFQILGKAYAVLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

40.2

Major BPS

55.9

0.15

1.2

Major PPT

72.3

0.5

0.8

65.6

30.3

Minor 5ss

31.2

-2.1

3.2

38.5

46.7

Minor BPS

41.4

-0.7

1.9

43.1

42.6

Associated Gene:

Gene:

DNAJC9

Ensembl Gene ID:

ENSAPLG00000026355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030306

2652398 - 2654957

2560