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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2653196_2653983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2653196 - 2653983

Intron Length:

788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTACTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

CTTTCCTAAAAG

Flanking Amino Acid:

KQKALARKRRAEKEAREAEK

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.9

35.3

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

81.5

0.71

0.8

78.6

34.6

Minor 5ss

31.1

-2.2

2.6

35.1

Minor BPS

61.4

0.22

1.9

68.4

44.9

Associated Gene:

Gene:

DNAJC9

Ensembl Gene ID:

ENSAPLG00000026355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030306

2652398 - 2654957

2560