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Intron Name: Anas_platyrhynchos_platyrhynchos_6_26663107_26663465_F

Intron Information:

Intron Rank:

149942

Intron Class:

major

Intron Phase:

Intron Coordinates:

26663107 - 26663465

Intron Length:

359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTGCACTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

74.4

37.7

Major BPS

74.6

0.61

1.4

34.5

Major PPT

86.1

0.81

0.8

81.1

30.9

Minor 5ss

30.9

-2.2

44.5

Minor BPS

52.6

0.16

1.8

73.36

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018194

26659883 - 26665259

5377

ENSAPLT00000036466

26661457 - 26665259

3803

ENSAPLT00000031215

26659695 - 26663865

4171

ENSAPLT00000028076

26652751 - 26663865

11115